CONCACAF Champions League 2021, Final tournament, Round of 16 |
 | 13.04.2021 |  | Portland Timbers | – | Marathón |  | 5:0 (2:0) |
| Portland |
CONCACAF Champions League 2019, Final tournament, Round of 16 |
| 27.02.2019 |  | Santos Laguna | – | Marathón | | 5:0 (3:0) |
| Torreón |
CONCACAF Champions League 2019, Final tournament, Round of 16 |
| 20.02.2019 | | Marathón | – | Santos Laguna | | 2:6 (0:3) |
| San Pedro Sula |
CONCACAF Champions League 2012/13, Final tournament, Group 4 |
| 24.10.2012 | | Seattle Sounders | – | Marathón | | 3:1 (2:1) |
| Seattle |
CONCACAF Champions League 2012/13, Final tournament, Group 4 |
| 19.09.2012 | | Marathón | – | Seattle Sounders | | 2:3 (1:1) |
| San Pedro Sula |
CONCACAF Champions League 2010/11, Final tournament, Group C |
| 20.10.2010 | | Marathón | – | Monterrey | | 0:1 (0:0) |
| San Pedro Sula |
CONCACAF Champions League 2010/11, Final tournament, Group C |
| 29.09.2010 | | Seattle Sounders | – | Marathón | | 2:0 (1:0) |
| Seattle |
CONCACAF Champions League 2010/11, Final tournament, Group C |
| 14.09.2010 | | Monterrey | – | Marathón | | 2:0 (1:0) |
| Monterrey |
CONCACAF Champions League 2010/11, Final tournament, Group C |
| 26.08.2010 |  | Saprissa | – | Marathón | | 4:1 (1:1) |
| San José |
CONCACAF Champions League 2010/11, Final tournament, Preliminary Round |
| 04.08.2010 | | Marathón | – | Tauro |  | 1:2 (1:2) |
| San Pedro Sula |
CONCACAF Champions League 2009/10, Final tournament, Quarterfinal |
| 18.03.2010 | | Universidad Nacional | – | Marathón | | 6:1 (3:0) |
| Ciudad de México |
CONCACAF Champions League 2009/10, Final tournament, Group B |
| 24.09.2009 | | DC United | – | Marathón | | 3:0 (0:0) |
| Washington |
CONCACAF Champions League 2009/10, Final tournament, Group B |
| 17.09.2009 | | Toluca | – | Marathón | | 7:0 (2:0) |
| Toluca de Lerdo |
CONCACAF Champions League 2008/09, Final tournament, Quarterfinal |
| 26.02.2009 |  | Puerto Rico Islanders | – | Marathón | | 2:1 (0:1) |
| Bayamón |
CONCACAF Champions League 2008/09, Final tournament, Group A |
| 30.09.2008 | | Saprissa | – | Marathón | | 2:1 (0:0) |
| San José |
CONCACAF Champions League 2008/09, Qualifying, Central American Zone, Central American Zone, Honduras playoff |
| 08.07.2008 | | Marathón | – | Olimpia | | 1:3 (1:2) |
| San Pedro Sula |
Copa de Campeones y Subcampeones CONCACAF 1988, Qualifying, Northern/Central Section, Round 3 |
| 24.08.1988 | | Olimpia | – | Marathón | | 2:0 |
| Tegucigalpa |
Copa de Campeones y Subcampeones CONCACAF 1988, Qualifying, Northern/Central Section, Round 3 |
| 18.08.1988 | | Marathón | – | Alajuelense | | 0:2 |
| Tegucigalpa |
Copa de Campeones y Subcampeones CONCACAF 1988, Qualifying, Northern/Central Section, Round 2, group 1 |
| 03.07.1988 | | Alajuelense | – | Marathón | | 1:0 |
| Ciudad de Guatemala |
Copa de Campeones y Subcampeones CONCACAF 1986/87, Qualifying, Central Section, Group 1, Round 1 |
| 04.05.1986 | | Marathón | – | Alianza |  | 0:1 |
| San Pedro Sula |
Copa de Campeones y Subcampeones CONCACAF 1981/82, Qualifying, Northern/Central Section, Round 3 |
| 20.10.1981 | | Atlético Marte | – | Marathón | | +:- |
| |
Copa de Campeones y Subcampeones CONCACAF 1980/81, Qualifying, Central Section, Round 1 |
| 29.05.1980 | | Herediano | – | Marathón | | 3:1 |
| Heredia |
Copa de Campeones y Subcampeones CONCACAF 1974, Qualifying, Central Section, Round 1 |
| 26.05.1974 |  | Municipal | – | Marathón | | 3:0 |
| Ciudad de Guatemala |
Copa de Campeones y Subcampeones CONCACAF 1974, Qualifying, Central Section, Round 1 |
| 19.05.1974 | | Marathón | – | Municipal | | 0:1 |
| San Pedro Sula |
Copa de Campeones y Subcampeones CONCACAF 1979, Qualifying, Central Section, Round 2 |
| | | FAS | – | Marathón | | +:- |
| Santa Ana |
